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Santorini Airport to Heraklion International Airport flight

Explore the cheapest one-way and round-trip flights from Santorini Airport to Heraklion International Airport over the next 90 days, with one-way fares from JPY 13,020 and round-trip from JPY 27,710. Based on Trip.com's latest 7-day flight data.

      • JTR 18:40
        13h 20m
        1 stop
        HER 08:00
        Santorini - Heraklion | Mon, Nov 23 | SKY express
        HER 21:50
        9h 45m
        1 stop
        JTR 07:35
        Heraklion - Santorini | Thu, Nov 26 | AEGEAN
        JPY 27,710 JPY 42,820
        35% off
        35% off
        JPY 42,820 JPY 27,710
      • JTR 06:00
        4h 50m
        1 stop
        HER 10:50
        Santorini - Heraklion | Sun, Nov 8 | AEGEAN
        HER 21:50
        9h 45m
        1 stop
        JTR 07:35
        Heraklion - Santorini | Wed, Nov 11 | AEGEAN
        JPY 29,340 JPY 42,820
        31% off
        31% off
        JPY 42,820 JPY 29,340
      • JTR 00:00
        7h 30m
        1 stop
        HER 07:30
        Santorini - Heraklion | Fri, Oct 16 | Ryanair
        HER 18:25
        6h
        1 stop
        JTR 00:25
        Heraklion - Santorini | Fri, Oct 16 | AEGEAN
        JPY 29,830 JPY 42,820
        30% off
        30% off
        JPY 42,820 JPY 29,830
      • JTR 21:45
        10h 15m
        1 stop
        HER 08:00
        Santorini - Heraklion | Thu, Oct 22 | SKY express
        HER 18:25
        4h 20m
        1 stop
        JTR 22:45
        Heraklion - Santorini | Fri, Oct 23 | AEGEAN
        JPY 29,860
        30% off
        JPY 42,820 JPY 29,860
      • JTR 08:20
        16h
        1 stop
        HER 00:20
        Santorini - Heraklion | Mon, Oct 19 | Ryanair
        HER 22:45
        9h 10m
        1 stop
        JTR 07:55
        Heraklion - Santorini | Thu, Oct 22 | SKY express
        JPY 30,020
        30% off
        JPY 42,820 JPY 30,020
      • JTR 00:05
        7h 55m
        1 stop
        HER 08:00
        Santorini - Heraklion | Tue, Oct 20 | Ryanair
        HER 08:10
        2h 45m
        1 stop
        JTR 10:55
        Heraklion - Santorini | Wed, Oct 21 | AEGEAN
        JPY 30,070
        30% off
        JPY 42,820 JPY 30,070
      • JTR 06:00
        2h 45m
        1 stop
        HER 08:45
        Santorini - Heraklion | Mon, Nov 23 | AEGEAN
        HER 17:10
        5h 5m
        1 stop
        JTR 22:15
        Heraklion - Santorini | Thu, Nov 26 | AEGEAN
        JPY 30,540
        28% off
        JPY 42,820 JPY 30,540
      • JTR 11:25
        6h 50m
        1 stop
        HER 18:15
        Santorini - Heraklion | Fri, Oct 23 | SKY express
        HER 22:25
        9h 30m
        1 stop
        JTR 07:55
        Heraklion - Santorini | Fri, Oct 23 | SKY express
        JPY 30,920
        28% off
        JPY 42,820 JPY 30,920
      • JTR 16:35
        4h 40m
        1 stop
        HER 21:15
        Santorini - Heraklion | Thu, Oct 15 | AEGEAN
        HER 08:10
        2h 45m
        1 stop
        JTR 10:55
        Heraklion - Santorini | Thu, Oct 22 | AEGEAN
        JPY 31,160
        27% off
        JPY 42,820 JPY 31,160
      • JTR 16:35
        4h 40m
        1 stop
        HER 21:15
        Santorini - Heraklion | Sat, Oct 24 | AEGEAN
        HER 13:00
        4h 25m
        1 stop
        JTR 17:25
        Heraklion - Santorini | Sun, Oct 25 | SKY express
        JPY 31,160
        27% off
        JPY 42,820 JPY 31,160
      • JTR 18:40
        5h 55m
        1 stop
        HER 00:35
        Santorini - Heraklion | Sat, Oct 17 | AEGEAN
        HER 22:25
        9h 30m
        1 stop
        JTR 07:55
        Heraklion - Santorini | Sat, Oct 24 | SKY express
        JPY 31,610
        26% off
        JPY 42,820 JPY 31,610
      • JTR 21:45
        10h 15m
        1 stop
        HER 08:00
        Santorini - Heraklion | Sat, Oct 24 | SKY express
        HER 13:00
        4h 25m
        1 stop
        JTR 17:25
        Heraklion - Santorini | Sun, Oct 25 | SKY express
        JPY 31,680
        26% off
        JPY 42,820 JPY 31,680
      • JTR 13:00
        17h 25m
        1 stop
        HER 14:00
        Santorini - Heraklion | Fri, Oct 16 | Normal Airline
        HER 15:00
        6h
        Direct
        JTR 16:00
        Heraklion - Santorini | Sun, Oct 18 | Normal Airline
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      • Cheapest nonstop
        JTR 17:35
        45m
        Direct
        HER 18:20
        Santorini - Heraklion | Mon, Oct 19 | AEGEAN
        JPY 31,070 JPY 41,990
        26% off
        26% off
        JPY 41,990 JPY 31,070
      • JTR 23:50
        24h 30m
        1 stop
        HER 00:20
        Santorini - Heraklion | Sun, Oct 25 | Ryanair
        JPY 13,020 JPY 41,990
        69% off
        69% off
        JPY 41,990 JPY 13,020
      • JTR 23:50
        15h 40m
        1 stop
        HER 15:30
        Santorini - Heraklion | Sun, Oct 18 | Ryanair
        JPY 13,420 JPY 41,990
        68% off
        68% off
        JPY 41,990 JPY 13,420
      • JTR 00:05
        20h 15m
        1 stop
        HER 20:20
        Santorini - Heraklion | Tue, Oct 27 | Ryanair
        JPY 15,360
        63% off
        JPY 41,990 JPY 15,360
      • JTR 21:45
        10h 15m
        1 stop
        HER 08:00
        Santorini - Heraklion | Thu, Oct 22 | SKY express
        JPY 15,850
        62% off
        JPY 41,990 JPY 15,850
      • JTR 18:40
        4h
        1 stop
        HER 22:40
        Santorini - Heraklion | Tue, Oct 27 | AEGEAN
        JPY 16,350
        61% off
        JPY 41,990 JPY 16,350
      • JTR 21:35
        10h 25m
        1 stop
        HER 08:00
        Santorini - Heraklion | Sat, Nov 21 | SKY express
        JPY 16,420
        61% off
        JPY 41,990 JPY 16,420
      • JTR 21:35
        10h 25m
        1 stop
        HER 08:00
        Santorini - Heraklion | Fri, Nov 20 | SKY express
        JPY 16,420
        61% off
        JPY 41,990 JPY 16,420
      • JTR 09:00
        23h
        1 stop
        HER 08:00
        Santorini - Heraklion | Mon, Nov 23 | SKY express
        JPY 16,540
        61% off
        JPY 41,990 JPY 16,540
      • JTR 08:10
        23h 50m
        1 stop
        HER 08:00
        Santorini - Heraklion | Fri, Nov 27 | AEGEAN
        JPY 16,710
        60% off
        JPY 41,990 JPY 16,710
      • JTR 08:10
        23h 50m
        1 stop
        HER 08:00
        Santorini - Heraklion | Fri, Nov 20 | AEGEAN
        JPY 16,710
        60% off
        JPY 41,990 JPY 16,710
      • JTR 09:00
        9h 15m
        1 stop
        HER 18:15
        Santorini - Heraklion | Thu, Dec 10 | SKY express
        JPY 16,780
        60% off
        JPY 41,990 JPY 16,780
      • JTR 21:35
        10h 25m
        1 stop
        HER 08:00
        Santorini - Heraklion | Sat, Dec 5 | SKY express
        JPY 16,800
        60% off
        JPY 41,990 JPY 16,800
      • JTR 13:00
        17h 25m
        1 stop
        HER 14:00
        Santorini - Heraklion | Fri, Oct 16 | Normal Airline
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Flight fares from Santorini Airport to Heraklion International Airport are based on the average fares across airlines for the next three months, based on Trip.com’s latest data.

Which airline offers the cheapest flights from Santorini Airport to Heraklion International Airport?

The cheapest airline flying from Santorini Airport to Heraklion International Airport is Ryanair (from JPY 13,020) among 3 carriers operating this route. Based on Trip.com's latest 7-day flight data.

Ryanair
From JPY 13,020
AEGEAN
From JPY 15,880
SKY express
From JPY 16,420

Find more flights and airlines

What is the flight schedule from Santorini Airport to Heraklion International Airport?

Check the schedule for flights from Santorini to Heraklion and find the flight that best matches your travel plans.

Flight info.
Departure
Arrival
Weekly Schedule

  1. A3353

    Santorini Airport

    08:23

    JTR

    45m

    Direct

    09:08

    ATH

    S M T W T F S
    Search

  2. A3306

    Athens International Airport "Eleftherios Venizelos"

    10:34

    ATH

    55m

    Direct

    11:29

    HER

    S M T W T F S

  3. A3351

    Santorini Airport

    06:00

    JTR

    45m

    Direct

    06:45

    ATH

    S M T W T F S
    Search

  4. A3306

    Athens International Airport "Eleftherios Venizelos"

    10:34

    ATH

    55m

    Direct

    11:29

    HER

    S M T W T F S

  5. GQ345

    Santorini Airport

    11:55

    JTR

    55m

    Direct

    12:50

    ATH

    S M T W T F S
    Search

  6. A3328

    Athens International Airport "Eleftherios Venizelos"

    23:45

    ATH

    50m

    Direct

    00:35

    HER

    S M T W T F S

  7. A3351

    Santorini Airport

    06:00

    JTR

    45m

    Direct

    06:45

    ATH

    S M T W T F S
    Search

  8. A3308

    Athens International Airport "Eleftherios Venizelos"

    11:25

    ATH

    55m

    Direct

    12:20

    HER

    S M T W T F S

  9. GQ341

    Santorini Airport

    08:30

    JTR

    45m

    Direct

    09:15

    ATH

    S M T W T F S
    Search

  10. GQ214

    Athens International Airport "Eleftherios Venizelos"

    17:25

    ATH

    50m

    Direct

    18:15

    HER

    S M T W T F S

  11. GQ347

    Santorini Airport

    14:15

    JTR

    55m

    Direct

    15:10

    ATH

    S M T W T F S
    Search

  12. GQ210

    Athens International Airport "Eleftherios Venizelos"

    07:10

    ATH

    50m

    Direct

    08:00

    HER

    S M T W T F -

  13. GQ341

    Santorini Airport

    08:30

    JTR

    45m

    Direct

    09:15

    ATH

    S M T W T F S
    Search

  14. GQ216

    Athens International Airport "Eleftherios Venizelos"

    20:55

    ATH

    50m

    Direct

    21:45

    HER

    S M T W T F S

  15. FR1237

    Santorini Airport

    07:30

    JTR

    50m

    Direct

    08:20

    ATH

    - M T W - F S
    Search

  16. GQ210

    Athens International Airport "Eleftherios Venizelos"

    07:10

    ATH

    50m

    Direct

    08:00

    HER

    S M T W T F -

  17. A3361

    Santorini Airport

    09:30

    JTR

    1h

    Direct

    10:30

    ATH

    S M T W T F S
    Search

  18. A3306

    Athens International Airport "Eleftherios Venizelos"

    10:34

    ATH

    55m

    Direct

    11:29

    HER

    S M T W T F S

  19. GQ345

    Santorini Airport

    11:55

    JTR

    55m

    Direct

    12:50

    ATH

    S M T W T F S
    Search

  20. GQ210

    Athens International Airport "Eleftherios Venizelos"

    07:10

    ATH

    50m

    Direct

    08:00

    HER

    S M T W T F -
Find more flights and airlines

About Santorini Airport and Heraklion International Airport

Learn about Santorini Airport (JTR) and Heraklion International Airport (HER) — including location, terminals, transportation, and travel tips.

Flight distance 121.93km
Cheapest one-way ticket price JPY 13,020
Cheapest return ticket price JPY 27,710

FAQs for Santorini Airport to Heraklion International Airport Flights

  • How many daily flights are there from Santorini Airport (JTR) to Heraklion International Airport (HER)?

    There are around 1 daily flights from Santorini Airport (JTR) to Heraklion International Airport (HER).
  • The earliest flight from Santorini Airport to Heraklion International Airport departs at 17:35, and the last departs at 17:35, with about 1 flights per day. Flight times may change, so please check the latest departure and arrival times before you travel.
  • The route from Santorini Airport (JTR) to Heraklion International Airport (HER) is quite popular. Without considering departure times or holidays, tickets cost around JPY 33,220 in October, the most expensive month to book this route.
    • The distance from Heraklion International Airport N. Kazantzakis to downtown is about 2km, by taxi about 20 minutes.
  • One-way flights from Santorini Airport to Heraklion International Airport currently start from JPY 13,020, and round-trip fares start from JPY 27,710. The current lowest fare is a Ryanair flight departing on Sun, Oct 25; prices may vary depending on availability.
  • Yes. AEGEAN operate direct flights from Santorini Airport to Heraklion International Airport, with an average flight time of 26 minutes, and around 2 weekly flights. Actual flight frequency may vary by season.
  • Based on Trip.com flight data for departures within the next 30 days with at most one stop, the average one-way price from Santorini Airport to Heraklion International Airport is JPY 23,730. Prices may vary depending on the departure date, airline, and availability.
  • Santorini Airport to Heraklion International Airport operates around 1 weekly flights, mainly by AEGEAN. Actual frequency may vary during holidays and seasonal schedule adjustments.
  • Enter Santorini Airport and Heraklion International Airport, select your departure date and number of passengers, then compare flights by price, flight duration, and baggage allowance. Once you've chosen a fare, review the change and refund rules, fill in passenger details, and pay to receive your booking confirmation.

Most popular destination

Note: Prices shown on this page are estimated lowest price and include all taxes and fees found in the last 24 hours.

Book with no extra fees

Prices displayed in this page are all-inclusive prices (incl. taxes, fuel surcharge, regulatory fees, etc) with all fees confirmed before payment. Fees for baggage, meals, Wi-Fi, or other additional services are also included as shown in the flight cards.

Real-time pricing updates

Prices, availability, and travel information on this page were updated within last 24 hours—even in real-time. The more popular the route, the more precise the data.

Change & Cancellation Policy

Trip.com displays flight cancellation and change policies for each flight ticket during the booking process, including fees and applicable conditions. Please check the following scenarios:
Voluntary cancellation/change:
To submit a change or cancellation request, go to the flight bookings page, select the option to change or cancel your booking, choose the relevant passengers and segment, and submit a request. Please note that additional charges may apply according to the airline ticket policy.
Cancellation/change due to a flight schedule change:
If the flight has been rescheduled and you would like to change or cancel your ticket, you can submit an involuntary cancellation request. For more details about change and cancellation policies, please check the customer support pages.